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Implementation:Scikit learn Scikit learn VarianceThreshold

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Knowledge Sources
Domains Machine Learning, Feature Selection
Last Updated 2026-02-08 15:00 GMT

Overview

Concrete tool for removing low-variance features from datasets, provided by scikit-learn.

Description

The VarianceThreshold class is a feature selector that removes all features whose variance does not meet a specified threshold. It operates only on features (X) and not on targets (y), making it suitable for unsupervised feature selection. It supports both dense and sparse input matrices and allows NaN values.

Usage

Use this selector as a simple baseline feature selection step to remove constant or near-constant features before applying more sophisticated feature selection or modeling techniques.

Code Reference

Source Location

Signature

class VarianceThreshold(SelectorMixin, BaseEstimator):
    def __init__(self, threshold=0.0):

Import

from sklearn.feature_selection import VarianceThreshold

I/O Contract

Inputs

Name Type Required Description
threshold float No Variance threshold; features below this are removed (default 0.0)
X array-like of shape (n_samples, n_features) Yes Training data for fitting

Outputs

Name Type Description
variances_ ndarray of shape (n_features,) Variances of individual features
n_features_in_ int Number of features seen during fit
X_transformed ndarray Reduced feature matrix with low-variance features removed

Usage Examples

Basic Usage

from sklearn.feature_selection import VarianceThreshold

X = [[0, 0, 1], [0, 1, 0], [1, 0, 0], [0, 1, 1], [0, 1, 0], [0, 1, 1]]
sel = VarianceThreshold(threshold=0.16)
X_selected = sel.fit_transform(X)
print(X_selected.shape)  # Features with variance > 0.16 are kept

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